Moist, warmly spiced, and packed with vegetables, these zucchini carrot muffins taste just like carrot cake — made with applesauce and Greek yogurt for a healthier muffin the whole family loves. Perfect for breakfast, snacks, and toddler lunchboxes.
2cup(250g) all-purpose flour or whole wheat pastry flour
1teaspoonbaking powder
1teaspoonbaking soda
⅛teaspoonfine sea salt
½teaspoonground cinnamon
⅛teaspoonground nutmeg
3tablespoonsturbinado cane sugar or sanding sugar
Instructions
Preheat the oven to 400°F with the rack in the center. Line 2 muffin pans with 12 liners, placing them in every other cup. Brush the top of the pan around each liner with oil or butter.
In a large bowl, whisk together the oil, applesauce, yogurt, eggs, vanilla extract, brown sugar, and white sugar until smooth.
Squeeze shredded zucchini in a clean tea towel or paper towels to remove excess moisture.
Add the zucchini and carrots to the wet ingredients and stir until combined.
In a separate bowl, whisk together the flour, baking powder, baking soda, salt, cinnamon, and nutmeg.
Add the dry ingredients to the wet ingredients. Fold until just combined — do not overmix.
Divide batter evenly into the prepared muffin cups (about ⅓ cup each). Sprinkle 1 teaspoon turbinado sugar over each muffin.
Bake at 400°F for 5 minutes. Rotate pan 180 degrees and reduce heat to 350°F. Bake 15–20 minutes more until a toothpick comes out clean.
Cool in pan on a wire rack for 5–10 minutes, then transfer muffins to the rack to cool completely.
Notes
Every other cup — Spacing the liners allows better air circulation, helping muffins rise taller and bake more evenly.
Brush the pan — Brushing oil or butter around each liner prevents the muffin tops from sticking when they puff over the edges.
Squeeze the zucchini — Remove excess moisture with a tea towel before adding. Too much moisture = gummy muffins.
Room temperature eggs — Set eggs out 20–30 minutes before baking for a smoother batter.
Every other cup — Spacing liners out helps muffins rise evenly and develop domed tops.
Don't overmix — Fold in dry ingredients just until combined for a tender crumb.
Gluten-free — Use a 1:1 GF flour blend and add 1 extra tablespoon of Greek yogurt. Let the batter rest at room temperature for 30 minutes before baking and cool entirely before enjoying.
Dairy-free — Substitute coconut yogurt for the Greek yogurt.
Freezing — Freeze cooled muffins for up to 3 months. Thaw at room temperature or microwave 30–45 seconds from frozen.
High altitude (5,000+ ft): Increase flour to 2¼ cups (280g), decrease baking powder and baking soda to ½ teaspoon each, reduce white sugar to ¼ cup, and lower the second bake temperature to 365°F instead of 350°F.